Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-3178 in MPM Mesothelioma Gordon Cluster 40 Table contains all genes in the MPM Mesothelioma Gordon cluster number 40. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-3178 55086 CXorf57 chromosome X open reading frame 57 [Source:HGNC Symbol;Acc:25486] zzz999 9420 CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1 [Source:HGNC Symbol;Acc:2652] zzz999 3614 IMPDH1 IMP (inosine 5'-monophosphate) dehydrogenase 1 [Source:HGNC Symbol;Acc:6052] M 2914 GRM4 glutamate receptor, metabotropic 4 [Source:HGNC Symbol;Acc:4596] M 55009 C19orf24 chromosome 19 open reading frame 24 [Source:HGNC Symbol;Acc:26073] M 23060 ZNF609 zinc finger protein 609 [Source:HGNC Symbol;Acc:29003] M 54943 DNAJC28 DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:HGNC Symbol;Acc:1297] zzz999 196743 PAOX polyamine oxidase (exo-N4-amino) [Source:HGNC Symbol;Acc:20837] M 1558 CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 [Source:HGNC Symbol;Acc:2622] zzz999 79955 PDZD7 PDZ domain containing 7 [Source:HGNC Symbol;Acc:26257] zzz999 58513 EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1 [Source:HGNC Symbol;Acc:24634] M 10223 GPA33 glycoprotein A33 (transmembrane) [Source:HGNC Symbol;Acc:4445] M 26040 SETBP1 SET binding protein 1 [Source:HGNC Symbol;Acc:15573] M 5273 SERPINB10 serpin peptidase inhibitor, clade B (ovalbumin), member 10 [Source:HGNC Symbol;Acc:8942] zzz999 1302 COL11A2 collagen, type XI, alpha 2 [Source:HGNC Symbol;Acc:2187] M 6540 SLC6A13 solute carrier family 6 (neurotransmitter transporter, GABA), member 13 [Source:HGNC Symbol;Acc:11046] M 6121 RPE65 retinal pigment epithelium-specific protein 65kDa [Source:HGNC Symbol;Acc:10294] zzz999 5244 ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:HGNC Symbol;Acc:45] zzz999 55177 FAM82A2 family with sequence similarity 82, member A2 [Source:HGNC Symbol;Acc:25550] M 29903 CCDC106 coiled-coil domain containing 106 [Source:HGNC Symbol;Acc:30181] M 1141 CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) [Source:HGNC Symbol;Acc:1962] M 10622 POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD) [Source:HGNC Symbol;Acc:30075] M 2074 ERCC6 excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:HGNC Symbol;Acc:3438] zzz999 6649 SOD3 superoxide dismutase 3, extracellular [Source:HGNC Symbol;Acc:11181] M 23038 WDTC1 WD and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:29175] M 6462 SHBG sex hormone-binding globulin [Source:HGNC Symbol;Acc:10839] zzz999 1047 CLGN calmegin [Source:HGNC Symbol;Acc:2060] zzz999 122704 MRPL52 mitochondrial ribosomal protein L52 [Source:HGNC Symbol;Acc:16655] zzz999 6036 RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) [Source:HGNC Symbol;Acc:10045] zzz999 1660 DHX9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:HGNC Symbol;Acc:2750] zzz999 18 ABAT 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:23] M 9612 NCOR2 nuclear receptor corepressor 2 [Source:HGNC Symbol;Acc:7673] M 247 ALOX15B arachidonate 15-lipoxygenase, type B [Source:HGNC Symbol;Acc:434] M 29924 EPN1 epsin 1 [Source:HGNC Symbol;Acc:21604] M 79754 ASB13 ankyrin repeat and SOCS box containing 13 [Source:HGNC Symbol;Acc:19765] M 57787 MARK4 MAP/microtubule affinity-regulating kinase 4 [Source:HGNC Symbol;Acc:13538] M 673 BRAF v-raf murine sarcoma viral oncogene homolog B1 [Source:HGNC Symbol;Acc:1097] M 3362 HTR6 5-hydroxytryptamine (serotonin) receptor 6 [Source:HGNC Symbol;Acc:5301] M 27287 VENTX VENT homeobox homolog (Xenopus laevis) [Source:HGNC Symbol;Acc:13639] M 11005 SPINK5 serine peptidase inhibitor, Kazal type 5 [Source:HGNC Symbol;Acc:15464] zzz999 4336 MOBP myelin-associated oligodendrocyte basic protein [Source:HGNC Symbol;Acc:7189] M 27345 KCNMB4 potassium large conductance calcium-activated channel, subfamily M, beta member 4 [Source:HGNC Symbol;Acc:6289] zzz999 83447 SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 [Source:HGNC Symbol;Acc:25319] zzz999 8310 ACOX3 acyl-CoA oxidase 3, pristanoyl [Source:HGNC Symbol;Acc:121] M 3354 HTR1E 5-hydroxytryptamine (serotonin) receptor 1E [Source:HGNC Symbol;Acc:5291] zzz999 27128 CYTH4 cytohesin 4 [Source:HGNC Symbol;Acc:9505] M 50804 MYEF2 myelin expression factor 2 [Source:HGNC Symbol;Acc:17940] M 6553 SLC9A5 solute carrier family 9 (sodium/hydrogen exchanger), member 5 [Source:HGNC Symbol;Acc:11078] M 23511 NUP188 nucleoporin 188kDa [Source:HGNC Symbol;Acc:17859] M 2765 GML glycosylphosphatidylinositol anchored molecule like protein [Source:HGNC Symbol;Acc:4375] M 8270 LAGE3 L antigen family, member 3 [Source:HGNC Symbol;Acc:26058] M 9021 SOCS3 suppressor of cytokine signaling 3 [Source:HGNC Symbol;Acc:19391] M 56154 TEX15 testis expressed 15 [Source:HGNC Symbol;Acc:11738] zzz999 11262 SP140 SP140 nuclear body protein [Source:HGNC Symbol;Acc:17133] zzz999 89874 SLC25A21 solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 [Source:HGNC Symbol;Acc:14411] zzz999 9252 RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 [Source:HGNC Symbol;Acc:10434] M 8359 HIST2H4B histone cluster 2, H4b [Source:HGNC Symbol;Acc:29607] zzz999 10675 CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:HGNC Symbol;Acc:2467] zzz999 9127 P2RX6 purinergic receptor P2X, ligand-gated ion channel, 6 [Source:HGNC Symbol;Acc:8538] M 6554 SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter family), member 1 [Source:HGNC Symbol;Acc:10905] zzz999 54881 TEX10 testis expressed 10 [Source:HGNC Symbol;Acc:25988] zzz999 3833 KIFC1 kinesin family member C1 [Source:HGNC Symbol;Acc:6389] M 64137 ABCG4 ATP-binding cassette, sub-family G (WHITE), member 4 [Source:HGNC Symbol;Acc:13884] M

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